STRINGSTRING
Tcr_0061 Tcr_0061 Tcr_0059 Tcr_0059 Tcr_0060 Tcr_0060 Tcr_0062 Tcr_0062 Tcr_0063 Tcr_0063 Tcr_0058 Tcr_0058 Tcr_0853 Tcr_0853 Tcr_0828 Tcr_0828 nuoI nuoI Tcr_1311 Tcr_1311 nuoB nuoB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
Tcr_0061Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pae:PA1056 multicomponent K+:H+ antiporter subunit D. (508 aa)    
Predicted Functional Partners:
Tcr_0059
Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit F; PFAM: multiple resistance and pH regulation protein F; KEGG: ilo:IL1911 multisubunit Na+/H+ antiporter, MnhF subunit.
 
 
 0.999
Tcr_0060
Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit E; PFAM: cation antiporter; KEGG: pae:PA1057 PhaE protein.
 
 
 0.999
Tcr_0062
Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit C; PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: pae:PA1055 multicomponent K+:H+ antiporter subunit C.
 
 
 0.999
Tcr_0063
Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit A/B; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L-like NADH/Ubiquinone/plastoquinone (complex I) Na+/H+ antiporter MnhB subunit-related protein; KEGG: pae:PA1054 probable NADH dehydrogenase I chain L.
 
0.999
Tcr_0058
Monovalent cation: proton antiporter-3 (CPA3) family transporter, subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: pae:PA1059 Na+/H+ antiporter.
 
 
 0.998
Tcr_0853
NADH-ubiquinone oxidoreductase chain 5 homolog; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: vch:VC1581 NADH dehydrogenase, putative.
 
 
 0.949
Tcr_0828
KEGG: ngo:NGO1740 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L-like NADH/Ubiquinone/plastoquinone (complex I).
 
 
0.927
nuoI
NADH dehydrogenase I chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.745
Tcr_1311
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: vch:VC0716 ferredoxin.
  
 
 0.742
nuoB
NADH dehydrogenase I chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity).
   
 
 0.660
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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